matlab toolbox cellnetanalyzer Search Results


metatool 5.0  (MathWorks Inc)
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MathWorks Inc metatool 5.0
Metatool 5.0, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab version 6.1  (MathWorks Inc)
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Matlab Version 6.1, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cellnetanalyzer (matlab toolbox)  (MathWorks Inc)
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MathWorks Inc cellnetanalyzer (matlab toolbox)
Cellnetanalyzer (Matlab Toolbox), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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toolbox cellnetanalyzer version 2017.3  (MathWorks Inc)
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MathWorks Inc toolbox cellnetanalyzer version 2017.3
Toolbox Cellnetanalyzer Version 2017.3, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cellnetanalyzer package for  (MathWorks Inc)
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MathWorks Inc cellnetanalyzer package for
Cellnetanalyzer Package For, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cellnetanalyzer matlab  (MathWorks Inc)
90
MathWorks Inc cellnetanalyzer matlab
List of software for genome-scale metabolic reconstruction and constraint-based modeling.
Cellnetanalyzer Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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plugin cellnetanalyzer version 2017.3  (MathWorks Inc)
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MathWorks Inc plugin cellnetanalyzer version 2017.3
List of software for genome-scale metabolic reconstruction and constraint-based modeling.
Plugin Cellnetanalyzer Version 2017.3, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cellnetanalyzer  (MathWorks Inc)
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MathWorks Inc cellnetanalyzer
List of software for genome-scale metabolic reconstruction and constraint-based modeling.
Cellnetanalyzer, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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toolbox cellnetanalyzer (cna)  (MathWorks Inc)
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MathWorks Inc toolbox cellnetanalyzer (cna)
List of software for genome-scale metabolic reconstruction and constraint-based modeling.
Toolbox Cellnetanalyzer (Cna), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cellnetanalyzer 7.0  (MathWorks Inc)
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MathWorks Inc cellnetanalyzer 7.0
List of software for genome-scale metabolic reconstruction and constraint-based modeling.
Cellnetanalyzer 7.0, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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berge algorithm  (MathWorks Inc)
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MathWorks Inc berge algorithm
Evolution of major concepts of MCSs based on target (red) and desired (green) regions of the flux space. The regions can be defined either via linear inequalities (as indicated here) or via appropriate sets of elementary modes/elementary flux vectors, from which the MCSs can then be computed via the duality-based or the <t>Berge</t> <t>algorithm,</t> respectively.
Berge Algorithm, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab toolbox  (MathWorks Inc)
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MathWorks Inc matlab toolbox
Evolution of major concepts of MCSs based on target (red) and desired (green) regions of the flux space. The regions can be defined either via linear inequalities (as indicated here) or via appropriate sets of elementary modes/elementary flux vectors, from which the MCSs can then be computed via the duality-based or the <t>Berge</t> <t>algorithm,</t> respectively.
Matlab Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


List of software for genome-scale metabolic reconstruction and constraint-based modeling.

Journal: Frontiers in Microbiology

Article Title: Microbiome modeling: a beginner's guide

doi: 10.3389/fmicb.2024.1368377

Figure Lengend Snippet: List of software for genome-scale metabolic reconstruction and constraint-based modeling.

Article Snippet: CellNetAnalyzer (Matlab) , Constraint-based modeling , von Kamp et al., .

Techniques: Software, Combined Bisulfite Restriction Analysis Assay

Evolution of major concepts of MCSs based on target (red) and desired (green) regions of the flux space. The regions can be defined either via linear inequalities (as indicated here) or via appropriate sets of elementary modes/elementary flux vectors, from which the MCSs can then be computed via the duality-based or the Berge algorithm, respectively.

Journal: Briefings in Bioinformatics

Article Title: Minimal cut sets in metabolic networks: from conceptual foundations to applications in metabolic engineering and biomedicine

doi: 10.1093/bib/bbaf188

Figure Lengend Snippet: Evolution of major concepts of MCSs based on target (red) and desired (green) regions of the flux space. The regions can be defined either via linear inequalities (as indicated here) or via appropriate sets of elementary modes/elementary flux vectors, from which the MCSs can then be computed via the duality-based or the Berge algorithm, respectively.

Article Snippet: The authors implemented a version of the Berge algorithm in MATLAB (which became and still is part of CellNetAnalyzer [ , ]), which included several preprocessing steps and smaller modifications to improve the runtime behavior of the algorithm.

Techniques:

Features of various MCS computation and analysis tools (as of January 2025)

Journal: Briefings in Bioinformatics

Article Title: Minimal cut sets in metabolic networks: from conceptual foundations to applications in metabolic engineering and biomedicine

doi: 10.1093/bib/bbaf188

Figure Lengend Snippet: Features of various MCS computation and analysis tools (as of January 2025)

Article Snippet: The authors implemented a version of the Berge algorithm in MATLAB (which became and still is part of CellNetAnalyzer [ , ]), which included several preprocessing steps and smaller modifications to improve the runtime behavior of the algorithm.

Techniques: